HL_8HU1_016

3D structure

PDB id

8HU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

CGAAGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8HU1_016 not in the Motif Atlas

Homologous match to HL_5J7L_016

Geometric discrepancy: 0.0832

The information below is about HL_5J7L_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

8HU1|1|A|C|726
8HU1|1|A|G|727
8HU1|1|A|A|728
8HU1|1|A|A|729
8HU1|1|A|G|730
8HU1|1|A|G|731

Current chains

Chain A

16S rRNA

Nearby chains

Chain O

30S ribosomal protein S15

Chain U

30S ribosomal protein S21