HL_8IBY_006

3D structure

PDB id

8IBY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of R2 with 5'ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

GGGUUCCGUUGGACC

Length

15 nucleotides

Bulged bases

8IBY|1|E|C|309

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IBY|1|E|G|262
8IBY|1|E|G|263
8IBY|1|E|G|264
8IBY|1|E|U|265
8IBY|1|E|U|266
8IBY|1|E|C|267
8IBY|1|E|C|268
8IBY|1|E|G|269
8IBY|1|E|U|304
8IBY|1|E|U|305
8IBY|1|E|G|306
8IBY|1|E|G|307
8IBY|1|E|A|308
8IBY|1|E|C|309
8IBY|1|E|C|310

Current chains

Chain E

5'ORF RNA

Nearby chains

Chain C

Reverse transcriptase-like protein