HL_8IFC_100

3D structure

PDB id

8IFC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Arbekacin-bound E.coli 70S ribosome in the PURE system

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUUA

Length

4 nucleotides

Bulged bases

8IFC|1|a|U|2797

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8IFC_100 not in the Motif Atlas

Geometric match to HL_4L8H_001

Geometric discrepancy: 0.1642

The information below is about HL_4L8H_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

8IFC|1|a|U|2796
8IFC|1|a|U|2797
8IFC|1|a|U|2798
8IFC|1|a|A|2799

Current chains

Chain a

23S ribosomal RNA

Nearby chains