HL_8IFD_089

3D structure

PDB id

8IFD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dibekacin-added human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IFD|1|2m|G|377
8IFD|1|2m|U|378
8IFD|1|2m|C|379
8IFD|1|2m|G|380
8IFD|1|2m|C|381
8IFD|1|2m|C|382
8IFD|1|2m|G|383
8IFD|1|2m|U|384
8IFD|1|2m|G|385
8IFD|1|2m|C|386
8IFD|1|2m|C|387

Current chains

Chain 2m

18S ribosomal RNA

Nearby chains

Chain 2t

40S ribosomal protein S8

Chain 2v

40S ribosomal protein S11