HL_8INE_027
3D structure
- PDB id
- 8INE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State G'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AAGCCUUU
- Length
- 8 nucleotides
- Bulged bases
- 8INE|1|2|C|1740, 8INE|1|2|C|1789
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8INE_027 not in the Motif Atlas
- Geometric match to HL_2Y9H_005
- Geometric discrepancy: 0.3965
- The information below is about HL_2Y9H_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_44506.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8INE|1|2|A|1737
8INE|1|2|A|1738
8INE|1|2|G|1739
8INE|1|2|C|1740
8INE|1|2|C|1789
8INE|1|2|U|1790
8INE|1|2|U|1791
8INE|1|2|U|1792
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain 5
- 5S ribosomal RNA; 5S rRNA
- Chain R
- Translation machinery-associated protein 16
- Chain c
- 60S ribosomal protein L21
- Chain r
- 60S ribosomal protein L5
Coloring options: