HL_8INF_040
3D structure
- PDB id
- 8INF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State F'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CCGCGAGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8INF_040 not in the Motif Atlas
- Geometric match to HL_7A0S_056
- Geometric discrepancy: 0.2268
- The information below is about HL_7A0S_056
- Detailed Annotation
- GNRA with extra cWW
- Broad Annotation
- GNRA with extra cWW
- Motif group
- HL_04259.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8INF|1|2|C|2560
8INF|1|2|C|2561
8INF|1|2|G|2562
8INF|1|2|C|2563
8INF|1|2|G|2564
8INF|1|2|A|2565
8INF|1|2|G|2566
8INF|1|2|G|2567
Current chains
- Chain 2
- 28S rRNA
Nearby chains
No other chains within 10ÅColoring options: