HL_8IP8_006

3D structure

PDB id

8IP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wheat 80S ribosome stalled on AUG-Stop boron dependently

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUGGG

Length

5 nucleotides

Bulged bases

8IP8|1|RB|G|208, 8IP8|1|RB|G|209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8IP8_006 not in the Motif Atlas

Geometric match to HL_5J7L_143

Geometric discrepancy: 0.0832

The information below is about HL_5J7L_143

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

8IP8|1|RB|C|206
8IP8|1|RB|U|207
8IP8|1|RB|G|208
8IP8|1|RB|G|209
8IP8|1|RB|G|210

Current chains

Chain RB

60S ribosomal RNA

Nearby chains

Chain EB

60S ribosomal protein uL4

Chain PA

60S ribosomal protein uL24