HL_8IP8_017

3D structure

PDB id

8IP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wheat 80S ribosome stalled on AUG-Stop boron dependently

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUCUGAAAC

Length

10 nucleotides

Bulged bases

8IP8|1|RB|C|693, 8IP8|1|RB|A|696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IP8|1|RB|G|690
8IP8|1|RB|U|691
8IP8|1|RB|U|692
8IP8|1|RB|C|693
8IP8|1|RB|U|694
8IP8|1|RB|G|695
8IP8|1|RB|A|696
8IP8|1|RB|A|697
8IP8|1|RB|A|698
8IP8|1|RB|C|699

Current chains

Chain RB

60S ribosomal RNA

Nearby chains

Chain EB

60S ribosomal protein uL4

Chain HA

60S ribosomal protein eL15

Chain KB

60S ribosomal protein eL13

Chain PA

60S ribosomal protein uL24

Chain SB

5.8S ribosomal RNA; 5.8S rRNA