HL_8IP8_029

3D structure

PDB id

8IP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wheat 80S ribosome stalled on AUG-Stop boron dependently

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUGGUCAUGGAAGUCGAAAUC

Length

21 nucleotides

Bulged bases

8IP8|1|RB|G|1240, 8IP8|1|RB|G|1241, 8IP8|1|RB|U|1245, 8IP8|1|RB|A|1255

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IP8|1|RB|G|1238
8IP8|1|RB|U|1239
8IP8|1|RB|G|1240
8IP8|1|RB|G|1241
8IP8|1|RB|U|1242
8IP8|1|RB|C|1243
8IP8|1|RB|A|1244
8IP8|1|RB|U|1245
8IP8|1|RB|G|1246
8IP8|1|RB|G|1247
8IP8|1|RB|A|1248
8IP8|1|RB|A|1249
8IP8|1|RB|G|1250
8IP8|1|RB|U|1251
8IP8|1|RB|C|1252
8IP8|1|RB|G|1253
8IP8|1|RB|A|1254
8IP8|1|RB|A|1255
8IP8|1|RB|A|1256
8IP8|1|RB|U|1257
8IP8|1|RB|C|1258

Current chains

Chain RB

60S ribosomal RNA

Nearby chains

Chain bl

eukaryotic release factor 1