HL_8IP8_040

3D structure

PDB id

8IP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wheat 80S ribosome stalled on AUG-Stop boron dependently

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CACGUCGCGCGG

Length

12 nucleotides

Bulged bases

8IP8|1|RB|C|1759, 8IP8|1|RB|G|1760, 8IP8|1|RB|C|1761

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IP8|1|RB|C|1754
8IP8|1|RB|A|1755
8IP8|1|RB|C|1756
8IP8|1|RB|G|1757
8IP8|1|RB|U|1758
8IP8|1|RB|C|1759
8IP8|1|RB|G|1760
8IP8|1|RB|C|1761
8IP8|1|RB|G|1762
8IP8|1|RB|C|1763
8IP8|1|RB|G|1764
8IP8|1|RB|G|1765

Current chains

Chain RB

60S ribosomal RNA

Nearby chains

Chain LA

60S ribosomal protein eL19

Chain NA

60S ribosomal protein uL23

Chain ZA

60S ribosomal protein eL22