HL_8IP8_073

3D structure

PDB id

8IP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wheat 80S ribosome stalled on AUG-Stop boron dependently

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCUUGCUG

Length

8 nucleotides

Bulged bases

8IP8|1|RB|U|3338

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8IP8_073 not in the Motif Atlas

Geometric match to HL_5ID6_001

Geometric discrepancy: 0.1661

The information below is about HL_5ID6_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

8IP8|1|RB|C|3336
8IP8|1|RB|C|3337
8IP8|1|RB|U|3338
8IP8|1|RB|U|3339
8IP8|1|RB|G|3340
8IP8|1|RB|C|3341
8IP8|1|RB|U|3342
8IP8|1|RB|G|3343

Current chains

Chain RB

60S ribosomal RNA

Nearby chains

Chain ca

40S ribosomal protein eS8