HL_8IP8_106

3D structure

PDB id

8IP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wheat 80S ribosome stalled on AUG-Stop boron dependently

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCCAUCCC

Length

8 nucleotides

Bulged bases

8IP8|1|aa|C|1365

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IP8|1|aa|G|1363
8IP8|1|aa|C|1364
8IP8|1|aa|C|1365
8IP8|1|aa|A|1366
8IP8|1|aa|U|1367
8IP8|1|aa|C|1368
8IP8|1|aa|C|1369
8IP8|1|aa|C|1370

Current chains

Chain aa

18S ribosomal RNA

Nearby chains

Chain la

40S ribosomal protein uS9

Chain ra

40S ribosomal protein eS19