HL_8IP9_018

3D structure

PDB id

8IP9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wheat 40S ribosome in complex with a tRNAi

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUAUUGUGUUGGCCUUCGG

Length

19 nucleotides

Bulged bases

8IP9|1|aa|U|838, 8IP9|1|aa|U|846

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IP9|1|aa|C|832
8IP9|1|aa|U|833
8IP9|1|aa|A|834
8IP9|1|aa|U|835
8IP9|1|aa|U|836
8IP9|1|aa|G|837
8IP9|1|aa|U|838
8IP9|1|aa|G|839
8IP9|1|aa|U|840
8IP9|1|aa|U|841
8IP9|1|aa|G|842
8IP9|1|aa|G|843
8IP9|1|aa|C|844
8IP9|1|aa|C|845
8IP9|1|aa|U|846
8IP9|1|aa|U|847
8IP9|1|aa|C|848
8IP9|1|aa|G|849
8IP9|1|aa|G|850

Current chains

Chain aa

18S ribosomal RNA

Nearby chains

Chain ib

40S ribosomal protein uS17