HL_8JSG_011

3D structure

PDB id

8JSG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 30S-IF3 complex from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

8JSG|1|g|U|421, 8JSG|1|g|C|422

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8JSG_011 not in the Motif Atlas

Homologous match to HL_5J7L_011

Geometric discrepancy: 0.2427

The information below is about HL_5J7L_011

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

8JSG|1|g|C|419
8JSG|1|g|U|420
8JSG|1|g|U|421
8JSG|1|g|C|422
8JSG|1|g|G|423
8JSG|1|g|G|424

Current chains

Chain g

16S ribosomal RNA

Nearby chains

Chain h

Small ribosomal subunit protein uS3

Chain l

Small ribosomal subunit protein uS4