HL_8JSG_028

3D structure

PDB id

8JSG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 30S-IF3 complex from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

8JSG|1|g|C|1267

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8JSG_028 not in the Motif Atlas

Homologous match to HL_6CZR_099

Geometric discrepancy: 0.4393

The information below is about HL_6CZR_099

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8JSG|1|g|C|1265
8JSG|1|g|G|1266
8JSG|1|g|C|1267
8JSG|1|g|G|1268
8JSG|1|g|A|1269
8JSG|1|g|G|1270

Current chains

Chain g

16S ribosomal RNA

Nearby chains

Chain s

Small ribosomal subunit protein uS13