HL_8K2B_028

3D structure

PDB id

8K2B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 39S mitoribosome with Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AAACAGUAACCU

Length

12 nucleotides

Bulged bases

8K2B|1|L1|A|1090

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8K2B|1|L1|A|1083
8K2B|1|L1|A|1084
8K2B|1|L1|A|1085
8K2B|1|L1|C|1086
8K2B|1|L1|A|1087
8K2B|1|L1|G|1088
8K2B|1|L1|U|1089
8K2B|1|L1|A|1090
8K2B|1|L1|A|1122
8K2B|1|L1|C|1123
8K2B|1|L1|C|1124
8K2B|1|L1|U|1125

Current chains

Chain L1

16s rRNA

Nearby chains

Chain LI

Large ribosomal subunit protein bL9m

Chain Lb

Large ribosomal subunit protein bL28m