HL_8KAH_002
3D structure
- PDB id
- 8KAH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of SpyCas9-crRNA-tracrRNA complex bound to 18nt target DNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.36 Å
Loop
- Sequence
- UGAAAA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_85603.1
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 304
Unit IDs
8KAH|1|I|U|72
8KAH|1|I|G|73
8KAH|1|I|A|74
8KAH|1|I|A|75
8KAH|1|I|A|76
8KAH|1|I|A|77
Current chains
- Chain I
- RNA (65-MER)
Nearby chains
- Chain B
- CRISPR-associated endonuclease Cas9/Csn1
- Chain F
- CRISPR-associated endonuclease Cas9/Csn1
- Chain J
- RNA (65-MER)
Coloring options: