8KAH Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_8KAH_001 | 1/I/55:58 | Mini UNCG | ||
| HL_8KAH_002 | 1/I/72:77 | GNRA | ||
| HL_8KAH_003 | 1/I/86:92 | No text annotation | geometric HL_5U3G_001 HL_75660.5 | |
| HL_8KAH_004 | 1/J/55:58 | Mini UNCG | geometric HL_7ZO1_002 HL_48778.2 | |
| HL_8KAH_005 | 1/J/72:77 | GNRA | geometric HL_4AOB_003 HL_37824.7 | |
| HL_8KAH_007 | 1/J/87:91 | tRNA D-loop | geometric HL_6AEG_004 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_8KAH_006 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_8KAH_002 | 1/A/26:29, 1/I/40:45 | No text annotation | geometric IL_5VW1_001 IL_82683.2 | |
| IL_8KAH_012 | 1/E/26:29, 1/J/40:45 | No text annotation | geometric IL_4ZT0_003 NA | |
| IL_8KAH_004 | 1/I/54:55, 1/I/58:60 | Single bulged U | ||
| IL_8KAH_006 | 1/J/54:55, 1/J/58:60 | Single bulged U | geometric IL_4ZT0_004 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_8KAH_007 | No text annotation | ||
| IL_8KAH_008 | No text annotation | ||
| IL_8KAH_009 | No text annotation | ||
| IL_8KAH_001 | No text annotation | ||
| IL_8KAH_003 | Isolated non-canonical cWW pair | ||
| IL_8KAH_010 | No text annotation | ||
| IL_8KAH_011 | No text annotation | ||
| IL_8KAH_005 | Isolated non-canonical cWW pair |
Valid loops
No loops found
Problematic loops
No problematic loops
Coloring options: