HL_8OEQ_169
3D structure
- PDB id
- 8OEQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (250uM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UAUUUUGUUGGUUUCUA
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OEQ_169 not in the Motif Atlas
- Homologous match to HL_8C3A_210
- Geometric discrepancy: 0.3768
- The information below is about HL_8C3A_210
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_08554.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
8OEQ|1|B|U|813
8OEQ|1|B|A|814
8OEQ|1|B|U|815
8OEQ|1|B|U|816
8OEQ|1|B|U|817
8OEQ|1|B|U|818
8OEQ|1|B|G|819
8OEQ|1|B|U|820
8OEQ|1|B|U|821
8OEQ|1|B|G|822
8OEQ|1|B|G|823
8OEQ|1|B|U|824
8OEQ|1|B|U|825
8OEQ|1|B|U|826
8OEQ|1|B|C|827
8OEQ|1|B|U|828
8OEQ|1|B|A|829
Current chains
- Chain B
- 18S ribosomal RNA
Nearby chains
- Chain N
- 40S ribosomal protein S11A
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