HL_8OI5_063
3D structure
- PDB id
- 8OI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CUGAACGCCUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 8OI5|1|1|G|3088, 8OI5|1|1|C|3092
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53269.1
- Basepair signature
- cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 11
Unit IDs
8OI5|1|1|C|3082
8OI5|1|1|U|3083
8OI5|1|1|G|3084
8OI5|1|1|A|3085
8OI5|1|1|A|3086
8OI5|1|1|C|3087
8OI5|1|1|G|3088
8OI5|1|1|C|3089
8OI5|1|1|C|3090
8OI5|1|1|U|3091
8OI5|1|1|C|3092
8OI5|1|1|U|3093
8OI5|1|1|A|3094
8OI5|1|1|A|3095
8OI5|1|1|G|3096
Current chains
- Chain 1
- 25S
Nearby chains
- Chain AN
- 60S ribosomal protein L40-B
- Chain q
- 60S ribosomal protein L9-B
- Chain w
- Ribosomal protein L13
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