HL_8OI5_105
3D structure
- PDB id
- 8OI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GUUAAAAUUC
- Length
- 10 nucleotides
- Bulged bases
- 8OI5|1|AS|U|1602, 8OI5|1|AS|U|1603
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OI5_105 not in the Motif Atlas
- Homologous match to HL_8C3A_035
- Geometric discrepancy: 0.0492
- The information below is about HL_8C3A_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_35087.1
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8OI5|1|AS|G|1595
8OI5|1|AS|U|1596
8OI5|1|AS|U|1597
8OI5|1|AS|A|1598
8OI5|1|AS|A|1599
8OI5|1|AS|A|1600
8OI5|1|AS|A|1601
8OI5|1|AS|U|1602
8OI5|1|AS|U|1603
8OI5|1|AS|C|1604
Current chains
- Chain AS
- 25S
Nearby chains
- Chain BM
- 60S ribosomal protein L19-A
- Chain BS
- 60S ribosomal protein L25
- Chain CB
- 60S ribosomal protein L34-B
- Chain CG
- 60S ribosomal protein L39
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