HL_8OI5_218

3D structure

PDB id

8OI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UUAGGAAAGGGGGCAACCUCAUUCUGGA

Length

28 nucleotides

Bulged bases

8OI5|1|CM|G|1685, 8OI5|1|CM|G|1686, 8OI5|1|CM|C|1687, 8OI5|1|CM|A|1688

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OI5|1|CM|U|1674
8OI5|1|CM|U|1675
8OI5|1|CM|A|1676
8OI5|1|CM|G|1677
8OI5|1|CM|G|1678
8OI5|1|CM|A|1679
8OI5|1|CM|A|1680
8OI5|1|CM|A|1681
8OI5|1|CM|G|1682
8OI5|1|CM|G|1683
8OI5|1|CM|G|1684
8OI5|1|CM|G|1685
8OI5|1|CM|G|1686
8OI5|1|CM|C|1687
8OI5|1|CM|A|1688
8OI5|1|CM|A|1689
8OI5|1|CM|C|1690
8OI5|1|CM|C|1691
8OI5|1|CM|U|1692
8OI5|1|CM|C|1693
8OI5|1|CM|A|1694
8OI5|1|CM|U|1695
8OI5|1|CM|U|1696
8OI5|1|CM|C|1697
8OI5|1|CM|U|1698
8OI5|1|CM|G|1699
8OI5|1|CM|G|1700
8OI5|1|CM|A|1701

Current chains

Chain CM

18S

Nearby chains

Chain CT

40S ribosomal protein S6