HL_8OIN_012

3D structure

PDB id

8OIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UACAUAACAAA

Length

11 nucleotides

Bulged bases

8OIN|1|AA|U|471, 8OIN|1|AA|A|476

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIN|1|AA|U|467
8OIN|1|AA|A|468
8OIN|1|AA|C|469
8OIN|1|AA|A|470
8OIN|1|AA|U|471
8OIN|1|AA|A|472
8OIN|1|AA|A|473
8OIN|1|AA|C|474
8OIN|1|AA|A|475
8OIN|1|AA|A|476
8OIN|1|AA|A|477

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AE

Mitoribosomal protein bs6m, mrps6

Chain AS

mS23

Chain Ab

Mitochondrial ribosomal protein S2

Chain Ac

Coiled-coil-helix-coiled-coil-helix domain containing 1

Chain Ad

28S ribosomal protein S5, mitochondrial isoform X2