HL_8OIN_027
3D structure
- PDB id
- 8OIN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGUAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIN_027 not in the Motif Atlas
- Homologous match to HL_4WF9_015
- Geometric discrepancy: 0.1405
- The information below is about HL_4WF9_015
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.4
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 399
Unit IDs
8OIN|1|B8|C|121
8OIN|1|B8|G|122
8OIN|1|B8|U|123
8OIN|1|B8|A|124
8OIN|1|B8|A|125
8OIN|1|B8|G|126
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BB
- 39S ribosomal protein L23, mitochondrial
- Chain BJ
- Mitochondrial ribosomal protein L34
- Chain BN
- Mitochondrial ribosomal protein L4
- Chain Bq
- Mitochondrial ribosomal protein L41
- Chain Bu
- Mitochondrial ribosomal protein L45
Coloring options: