HL_8OIN_035

3D structure

PDB id

8OIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AAACCCUAAAUU

Length

12 nucleotides

Bulged bases

8OIN|1|B8|C|404

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIN|1|B8|A|400
8OIN|1|B8|A|401
8OIN|1|B8|A|402
8OIN|1|B8|C|403
8OIN|1|B8|C|404
8OIN|1|B8|C|405
8OIN|1|B8|U|406
8OIN|1|B8|A|407
8OIN|1|B8|A|408
8OIN|1|B8|A|409
8OIN|1|B8|U|410
8OIN|1|B8|U|411

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BD

Mitochondrial ribosomal protein L27

Chain BG

uL30m

Chain BU

uL16m

Chain Bn

Mitochondrial ribosomal protein L38

Chain Bw

39S ribosomal protein L48, mitochondrial