HL_8OIN_044
3D structure
- PDB id
- 8OIN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAACACAG
- Length
- 8 nucleotides
- Bulged bases
- 8OIN|1|B8|A|762, 8OIN|1|B8|A|764, 8OIN|1|B8|A|766
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIN_044 not in the Motif Atlas
- Homologous match to HL_7RQB_040
- Geometric discrepancy: 0.1661
- The information below is about HL_7RQB_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64430.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
8OIN|1|B8|C|760
8OIN|1|B8|A|761
8OIN|1|B8|A|762
8OIN|1|B8|C|763
8OIN|1|B8|A|764
8OIN|1|B8|C|765
8OIN|1|B8|A|766
8OIN|1|B8|G|767
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BA
- uL22m
- Chain BJ
- Mitochondrial ribosomal protein L34
- Chain Bq
- Mitochondrial ribosomal protein L41
- Chain Bu
- Mitochondrial ribosomal protein L45
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