HL_8OIN_046

3D structure

PDB id

8OIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AGCAUUACUAGUAUU

Length

15 nucleotides

Bulged bases

8OIN|1|B8|A|853, 8OIN|1|B8|U|855, 8OIN|1|B8|U|863

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIN|1|B8|A|850
8OIN|1|B8|G|851
8OIN|1|B8|C|852
8OIN|1|B8|A|853
8OIN|1|B8|U|854
8OIN|1|B8|U|855
8OIN|1|B8|A|856
8OIN|1|B8|C|857
8OIN|1|B8|U|858
8OIN|1|B8|A|859
8OIN|1|B8|G|860
8OIN|1|B8|U|861
8OIN|1|B8|A|862
8OIN|1|B8|U|863
8OIN|1|B8|U|864

Current chains

Chain B8

16S rRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BL

uL2m

Chain Bm

Mitochondrial ribosomal protein L37