HL_8OIN_050
3D structure
- PDB id
- 8OIN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUGAAGAGGC
- Length
- 10 nucleotides
- Bulged bases
- 8OIN|1|B8|A|1025, 8OIN|1|B8|A|1026, 8OIN|1|B8|G|1027
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIN_050 not in the Motif Atlas
- Homologous match to HL_4WF9_047
- Geometric discrepancy: 0.1482
- The information below is about HL_4WF9_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
8OIN|1|B8|G|1022
8OIN|1|B8|U|1023
8OIN|1|B8|G|1024
8OIN|1|B8|A|1025
8OIN|1|B8|A|1026
8OIN|1|B8|G|1027
8OIN|1|B8|A|1028
8OIN|1|B8|G|1029
8OIN|1|B8|G|1030
8OIN|1|B8|C|1031
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BH
- Mitochondrial ribosomal protein L32
- Chain BM
- ICT1
- Chain BZ
- Mitochondrial ribosomal protein L21
- Chain Be
- Mitochondrial ribosomal protein L57
- Chain Bh
- Mitochondrial ribosomal protein S18A
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