HL_8OIN_051

3D structure

PDB id

8OIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AAACAACUCAACCACAAAGGGAUAAAACAU

Length

30 nucleotides

Bulged bases

8OIN|1|B8|A|1096, 8OIN|1|B8|G|1112, 8OIN|1|B8|A|1113, 8OIN|1|B8|U|1114, 8OIN|1|B8|A|1120

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIN|1|B8|A|1092
8OIN|1|B8|A|1093
8OIN|1|B8|A|1094
8OIN|1|B8|C|1095
8OIN|1|B8|A|1096
8OIN|1|B8|A|1097
8OIN|1|B8|C|1098
8OIN|1|B8|U|1099
8OIN|1|B8|C|1100
8OIN|1|B8|A|1101
8OIN|1|B8|A|1102
8OIN|1|B8|C|1103
8OIN|1|B8|C|1104
8OIN|1|B8|A|1105
8OIN|1|B8|C|1106
8OIN|1|B8|A|1107
8OIN|1|B8|A|1108
8OIN|1|B8|A|1109
8OIN|1|B8|G|1110
8OIN|1|B8|G|1111
8OIN|1|B8|G|1112
8OIN|1|B8|A|1113
8OIN|1|B8|U|1114
8OIN|1|B8|A|1115
8OIN|1|B8|A|1116
8OIN|1|B8|A|1117
8OIN|1|B8|A|1118
8OIN|1|B8|C|1119
8OIN|1|B8|A|1120
8OIN|1|B8|U|1121

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BO

Mitochondrial ribosomal protein L9

Chain Bj

39S ribosomal protein L1, mitochondrial