HL_8OIN_053

3D structure

PDB id

8OIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUACAAAAAACCC

Length

13 nucleotides

Bulged bases

8OIN|1|B8|C|1167, 8OIN|1|B8|A|1168, 8OIN|1|B8|C|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIN|1|B8|G|1164
8OIN|1|B8|U|1165
8OIN|1|B8|A|1166
8OIN|1|B8|C|1167
8OIN|1|B8|A|1168
8OIN|1|B8|A|1169
8OIN|1|B8|A|1170
8OIN|1|B8|A|1171
8OIN|1|B8|A|1172
8OIN|1|B8|A|1173
8OIN|1|B8|C|1174
8OIN|1|B8|C|1175
8OIN|1|B8|C|1176

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BD

Mitochondrial ribosomal protein L27

Chain BU

uL16m

Chain Bn

Mitochondrial ribosomal protein L38

Chain Bw

39S ribosomal protein L48, mitochondrial