3D structure

PDB id
8OIN (explore in PDB, NAKB, or RNA 3D Hub)
Description
55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
GUAACUAAUAAUAUAC
Length
16 nucleotides
Bulged bases
8OIN|1|B8|A|689
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8OIN|1|B8|G|682
8OIN|1|B8|U|683
8OIN|1|B8|A|684
8OIN|1|B8|A|685
8OIN|1|B8|C|686
8OIN|1|B8|U|687
8OIN|1|B8|A|688
8OIN|1|B8|A|689
8OIN|1|B8|U|690
8OIN|1|B8|A|691
8OIN|1|B8|A|692
8OIN|1|B8|U|693
8OIN|1|B8|A|694
8OIN|1|B8|U|695
8OIN|1|B8|A|696
8OIN|1|B8|C|697

Current chains

Chain B8
16S rRNA

Nearby chains

Chain BA
uL22m
Chain BB
39S ribosomal protein L23, mitochondrial
Chain BV
bL17m
Chain Bi
39S ribosomal protein S30, mitochondrial
Chain Bu
Mitochondrial ribosomal protein L45

Coloring options:

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