HL_8OIN_080

3D structure

PDB id

8OIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UAAUGAUUUAAUCUUAACCUA

Length

21 nucleotides

Bulged bases

8OIN|1|B8|U|1521, 8OIN|1|B8|U|1527

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIN|1|B8|U|1513
8OIN|1|B8|A|1514
8OIN|1|B8|A|1515
8OIN|1|B8|U|1516
8OIN|1|B8|G|1517
8OIN|1|B8|A|1518
8OIN|1|B8|U|1519
8OIN|1|B8|U|1520
8OIN|1|B8|U|1521
8OIN|1|B8|A|1522
8OIN|1|B8|A|1523
8OIN|1|B8|U|1524
8OIN|1|B8|C|1525
8OIN|1|B8|U|1526
8OIN|1|B8|U|1527
8OIN|1|B8|A|1528
8OIN|1|B8|A|1529
8OIN|1|B8|C|1530
8OIN|1|B8|C|1531
8OIN|1|B8|U|1532
8OIN|1|B8|A|1533

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BR

39S ribosomal protein L13, mitochondrial

Chain Bb

Mitochondrial ribosomal protein L53

Chain Bh

Mitochondrial ribosomal protein S18A

Chain Bl

Ribosomal protein