HL_8OIR_012

3D structure

PDB id

8OIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S human mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAAAUCAACAAA

Length

12 nucleotides

Bulged bases

8OIR|1|AA|A|478

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIR|1|AA|U|468
8OIR|1|AA|A|469
8OIR|1|AA|A|470
8OIR|1|AA|A|471
8OIR|1|AA|U|472
8OIR|1|AA|C|473
8OIR|1|AA|A|474
8OIR|1|AA|A|475
8OIR|1|AA|C|476
8OIR|1|AA|A|477
8OIR|1|AA|A|478
8OIR|1|AA|A|479

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AE

28S ribosomal protein S6, mitochondrial

Chain AS

28S ribosomal protein S23, mitochondrial

Chain Ab

28S ribosomal protein S2, mitochondrial

Chain Ac

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

Chain Ad

28S ribosomal protein S5, mitochondrial