RNA 3D Hub //

8OIR Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_8OIR_0011/AA/7:17No text annotation
homologous
HL_4LFB_001
HL_73535.1
HL_8OIR_0021/AA/54:61No text annotation
HL_8OIR_0031/AA/87:93No text annotation
geometric
HL_6U8D_003
HL_32346.6
HL_8OIR_0041/AA/121:126GNRA
geometric
HL_6N2V_002
HL_34789.2
HL_8OIR_0051/AA/145:149No text annotation
geometric
HL_5TBW_004
NA
HL_8OIR_0061/AA/157:162No text annotation
HL_8OIR_0071/AA/195:200GNRA
homologous
HL_4LFB_010
HL_34789.2
HL_8OIR_0081/AA/247:252GNRA
geometric
HL_1G1X_003
NA
HL_8OIR_0091/AA/342:351No text annotation
geometric
HL_4LFB_015
HL_38491.2
HL_8OIR_0101/AA/376:381GNRA
geometric
HL_4V88_207
NA
HL_8OIR_0111/AA/427:437No text annotation
homologous
HL_4LFB_017
HL_38491.2
HL_8OIR_0121/AA/468:479No text annotation
HL_8OIR_0131/AA/503:508Mini UNCG
geometric
HL_6TQA_003
NA
HL_8OIR_0141/AA/570:579No text annotation
homologous
HL_5J7L_021
NA
HL_8OIR_0151/AA/634:640No text annotation
geometric
HL_5U3G_001
HL_75660.7
HL_8OIR_0161/AA/663:668No text annotation
HL_8OIR_0171/AA/726:732No text annotation
geometric
HL_5NFV_001
HL_69752.4
HL_8OIR_0181/AA/752:760T-loop with 2 bulged bases not stacked
geometric
HL_3F2X_001
HL_13999.2
HL_8OIR_0191/AA/793:803No text annotation
homologous
HL_4LFB_030
HL_86432.1
HL_8OIR_0201/AA/875:881No text annotation
geometric
HL_5M3H_001
NA
HL_8OIR_0211/AA/933:938GNRA
homologous
HL_4LFB_032
HL_34789.2
HL_8OIR_0221/AG/13:19tRNA D-loop
geometric
HL_3AL0_001
NA
HL_8OIR_0231/AG/28:36tRNA anticodon loop
geometric
HL_4TUE_034
NA
HL_8OIR_0251/B8/52:59No text annotation
geometric
HL_4WF9_006
HL_48677.1
HL_8OIR_0261/B8/76:82No text annotation
geometric
HL_7A0S_008
HL_76371.2
HL_8OIR_0271/B8/116:121GNRA
homologous
HL_4WF9_015
HL_34789.2
HL_8OIR_0281/B8/161:169No text annotation
homologous
HL_7RQB_017
NA
HL_8OIR_0291/B8/177:186T-loop with 2 stacked bulged bases
geometric
HL_5J7L_150
NA
HL_8OIR_0301/B8/214:219No text annotation
geometric
HL_5J7L_143
NA
HL_8OIR_0311/B8/264:270GNRA related
geometric
HL_5J7L_179
NA
HL_8OIR_0321/B8/284:293No text annotation
homologous
HL_7RQB_023
NA
HL_8OIR_0331/B8/318:326No text annotation
geometric
HL_5TBW_021
NA
HL_8OIR_0341/B8/365:370No text annotation
homologous
HL_4WF9_025
HL_27530.1
HL_8OIR_0351/B8/394:405No text annotation
HL_8OIR_0361/B8/437:444GNRA
homologous
HL_4WF9_027
HL_34789.2
HL_8OIR_0371/B8/459:466No text annotation
homologous
HL_5J7L_160
NA
HL_8OIR_0381/B8/505:515No text annotation
homologous
HL_6PRV_001
HL_20174.1
HL_8OIR_0391/B8/532:539GNRA wlth tandem sheared
homologous
HL_6PRV_002
HL_98423.2
HL_8OIR_0401/B8/609:616No text annotation
geometric
HL_1KH6_003
HL_33487.1
HL_8OIR_0411/B8/649:654UNCG variation
geometric
HL_6DME_002
HL_61337.2
HL_8OIR_0431/B8/730:733Mini UNCG
geometric
HL_7A0S_039
HL_90436.2
HL_8OIR_0441/B8/758:765No text annotation
homologous
HL_7RQB_040
NA
HL_8OIR_0451/B8/827:837No text annotation
homologous
HL_7RQB_045
NA
HL_8OIR_0461/B8/848:862No text annotation
HL_8OIR_0471/B8/885:890No text annotation
geometric
HL_5TBW_006
NA
HL_8OIR_0481/B8/904:913No text annotation
homologous
HL_9DFE_046
HL_82185.1
HL_8OIR_0491/B8/942:950No text annotation
homologous
HL_7A0S_048
HL_61418.2
HL_8OIR_0501/B8/1020:1029No text annotation
homologous
HL_4WF9_047
HL_78372.1
HL_8OIR_0521/B8/1142:1150No text annotation
homologous
HL_7RQB_053
NA
HL_8OIR_0531/B8/1158:1170No text annotation
HL_8OIR_0541/B8/1192:1200No text annotation
geometric
HL_2ZZM_002
HL_33487.1
HL_8OIR_0551/B8/1232:1237GNRA
geometric
HL_5TBW_019
NA
HL_8OIR_0561/B8/1288:1296No text annotation
homologous
HL_4WF9_056
HL_52011.1
HL_8OIR_0571/B8/1345:1352GNRA variation
homologous
HL_4WF9_057
HL_46665.2
HL_8OIR_0581/B8/1368:1374No text annotation
homologous
HL_5J7L_195
NA
HL_8OIR_0591/B8/1411:1416GNRA
homologous
HL_7RQB_063
NA
HL_8OIR_0601/B8/1456:1461GNRA
geometric
HL_5B2T_003
HL_34789.2
HL_8OIR_0611/B8/1484:1489No text annotation
geometric
HL_5FMZ_001
HL_19413.2
HL_8OIR_0621/B8/1506:1523No text annotation
geometric
HL_7A0S_074
NA
HL_8OIR_0631/B8/1546:1554No text annotation
geometric
HL_7RQB_068
NA
HL_8OIR_0641/B9/12:21tRNA D-loop
geometric
HL_5B63_003
HL_20490.1
HL_8OIR_0671/B9/29:37tRNA anticodon loop
geometric
HL_1FIR_005
HL_81376.2

Problematic loops

#loop idProblemSequence
HL_8OIR_024No text annotation
HL_8OIR_042No text annotation
HL_8OIR_051UNCG variation
HL_8OIR_065No text annotation
HL_8OIR_066No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_8OIR_0011/AA/2:4,
1/AA/20:21		Single bulged U
geometric
IL_1S03_005
IL_97561.2
IL_8OIR_0021/AA/27:29,
1/AA/274:276		No text annotation
geometric
IL_1NBS_006
NA
IL_8OIR_0031/AA/38:39,
1/AA/212:214		Single bulged A
homologous
IL_5J7L_002
NA
IL_8OIR_0041/AA/43:45,
1/AA/175:176		Single bulged A
geometric
IL_6WPI_001
IL_14190.2
IL_8OIR_0051/AA/47:49,
1/AA/172:173		Minor groove platform
homologous
IL_4LFB_004
IL_34520.2
IL_8OIR_0061/AA/80:82,
1/AA/97:100		Minor groove platform with extra cWW
geometric
IL_7RQB_031
NA
IL_8OIR_0071/AA/82:85,
1/AA/95:97		Minor groove platform with extra cWW
geometric
IL_7RQB_031
NA
IL_8OIR_0081/AA/109:114,
1/AA/132:139		Kink-turn with non-sequential stacking
geometric
IL_4LFB_011
IL_46174.4
IL_8OIR_0091/AA/115:118,
1/AA/130:131		Major groove platform; stack outside cWW
geometric
IL_3DIL_004
IL_74641.2
IL_8OIR_1081/AA/115:119,
1/AA/128:131		No text annotation
IL_8OIR_0101/AA/118:119,
1/AA/128:130		No text annotation
IL_8OIR_0111/AA/183:185,
1/AA/208:209		Single bulged U
homologous
IL_5J7L_017
NA
IL_8OIR_0121/AA/187:191,
1/AA/205:206		C-loop
homologous
IL_5J7L_018
NA
IL_8OIR_0131/AA/191:192,
1/AA/203:205		Single bulged A
geometric
IL_2QUX_002
IL_14190.2
IL_8OIR_0141/AA/229:238,
1/AA/263:266		No text annotation
IL_8OIR_0151/AA/240:246,
1/AA/253:261		Kink-turn related
geometric
IL_4V88_415
NA
IL_8OIR_0161/AA/288:294,
1/AA/486:487		No text annotation
homologous
IL_5J7L_026
NA
IL_8OIR_0171/AA/299:303,
1/AA/397:402		No text annotation
IL_8OIR_1091/AA/305:321,
1/AA/389:395		No text annotation
IL_8OIR_0181/AA/327:333,
1/AA/361:367		No text annotation
IL_8OIR_0191/AA/335:337,
1/AA/357:359		Isolated non-canonical cWW pair
geometric
IL_4LFB_010
IL_01003.2
IL_8OIR_0201/AA/339:341,
1/AA/352:355		No text annotation
IL_8OIR_0211/AA/373:375,
1/AA/382:383		Other IL
geometric
IL_3WBM_004
IL_18188.1
IL_8OIR_0221/AA/415:419,
1/AA/445:446		Left turn
homologous
IL_5J7L_036
NA
IL_8OIR_0231/AA/420:424,
1/AA/440:444		tSH-tHW-tHS
homologous
IL_4LFB_033
IL_05821.1
IL_8OIR_0241/AA/462:464,
1/AA/483:485		Isolated non-canonical cWW pair
geometric
IL_3MEI_002
IL_01003.2
IL_8OIR_0251/AA/492:500,
1/AA/511:517		No text annotation
IL_8OIR_0261/AA/528:529,
1/AA/830:832		Single bulged A
homologous
IL_4LFB_035
IL_14190.2
IL_8OIR_0271/AA/531:533,
1/AA/827:828		Single bulged G
homologous
IL_6CZR_148
NA
IL_8OIR_0281/AA/539:543,
1/AA/817:821		C-loop
geometric
IL_8C3A_449
NA
IL_8OIR_0291/AA/561:562,
1/AA/708:710		Minor groove platform
homologous
IL_4LFB_038
IL_34520.2
IL_8OIR_0301/AA/597:605,
1/AA/693:698		No text annotation
IL_8OIR_0311/AA/606:608,
1/AA/691:692		Single bulged U
homologous
IL_5J7L_046
NA
IL_8OIR_0321/AA/610:614,
1/AA/687:689		Isolated cWS basepair
homologous
IL_4LFB_044
IL_82453.1
IL_8OIR_0331/AA/615:616,
1/AA/682:686		Minor groove platform
homologous
IL_6CZR_155
NA
IL_8OIR_0341/AA/618:619,
1/AA/678:680		Single bulged A
homologous
IL_5J7L_049
NA
IL_8OIR_0351/AA/619:621,
1/AA/676:678		Isolated non-canonical cWW pair
geometric
IL_5J7L_050
NA
IL_8OIR_0361/AA/627:630,
1/AA/651:654		Double sheared
geometric
IL_1SAQ_002
NA
IL_8OIR_0371/AA/631:632,
1/AA/642:650		No text annotation
geometric
IL_8S95_001
IL_34520.2
IL_8OIR_0381/AA/741:746,
1/AA/766:771		No text annotation
IL_8OIR_0391/AA/836:838,
1/AA/919:922		No text annotation
homologous
IL_5J7L_058
NA
IL_8OIR_1101/AA/838:841,
1/AA/915:919		No text annotation
homologous
IL_5J7L_059
NA
IL_8OIR_0411/AA/842:844,
1/AA/912:914		Isolated non-canonical cWW pair
geometric
IL_4V88_465
NA
IL_8OIR_0421/AA/844:848,
1/AA/907:912		Partly complementary
homologous
IL_6CZR_167
NA
IL_8OIR_0431/AA/853:857,
1/AA/899:902		UAA/GAN related
geometric
IL_2R8S_002
IL_77691.7
IL_8OIR_0441/AA/860:863,
1/AA/893:896		Tandem non-canonical cWW pairs
geometric
IL_5TBW_128
NA
IL_8OIR_0451/AA/863:864,
1/AA/891:893		Single bulged C
geometric
IL_3SN2_002
IL_05642.2
IL_8OIR_0461/AA/864:867,
1/AA/888:891		No text annotation
IL_8OIR_1181/AA/869:874,
1/AA/882:886		No text annotation
IL_8OIR_0471/AG/4:6,
1/AG/62:64		Isolated non-canonical cWW pair
geometric
IL_4J50_002
IL_01003.2
IL_8OIR_0491/B8/2:8,
1/B8/127:146		No text annotation
IL_8OIR_0501/B8/12:13,
1/B8/98:100		Single bulged A
homologous
IL_7RQB_002
NA
IL_8OIR_0511/B8/69:75,
1/B8/83:88		7x6 Sarcin-Ricin; G-bulge
geometric
IL_4V9F_106
IL_02666.1
IL_8OIR_0521/B8/175:177,
1/B8/186:188		Isolated non-canonical cWW pair
homologous
IL_5J7L_257
NA
IL_8OIR_0531/B8/207:209,
1/B8/225:227		Isolated non-canonical cWW pair
geometric
IL_4E59_001
IL_01003.2
IL_8OIR_0541/B8/210:213,
1/B8/220:224		No text annotation
IL_8OIR_0551/B8/234:236,
1/B8/346:348		Isolated non-canonical cWW pair
geometric
IL_4WF9_020
IL_01003.2
IL_8OIR_0561/B8/236:240,
1/B8/339:346		tHW-tHW cross-strand stack
homologous
IL_7RQB_018
NA
IL_8OIR_0571/B8/243:245,
1/B8/334:336		Isolated non-canonical cWW pair
geometric
IL_5TBW_079
NA
IL_8OIR_0581/B8/255:257,
1/B8/307:309		Isolated non-canonical cWW contact
geometric
IL_5UNE_001
IL_87720.1
IL_8OIR_0591/B8/259:260,
1/B8/303:305		Single bulged A
geometric
IL_5J7L_261
NA
IL_8OIR_0601/B8/278:281,
1/B8/296:298		Major groove platform with extra cWW
homologous
IL_7RQB_022
NA
IL_8OIR_0611/B8/315:317,
1/B8/327:331		Multiple bulged bases
geometric
IL_7A0S_021
IL_89509.1
IL_8OIR_0621/B8/376:378,
1/B8/421:424		No text annotation
geometric
IL_4N0T_004
IL_32983.2
IL_8OIR_0631/B8/387:393,
1/B8/406:412		No text annotation
geometric
IL_5XWG_002
IL_74768.1
IL_8OIR_0641/B8/475:477,
1/B8/584:585		Single bulged C
homologous
IL_5J7L_276
NA
IL_8OIR_0651/B8/479:483,
1/B8/578:582		UAA/GAN
homologous
IL_7RQB_036
NA
IL_8OIR_0661/B8/498:500,
1/B8/520:522		Isolated near basepair
geometric
IL_2ZI0_001
IL_42997.5
IL_8OIR_0671/B8/500:503,
1/B8/517:520		No text annotation
homologous
IL_6PRV_001
IL_28482.1
IL_8OIR_0681/B8/527:530,
1/B8/541:542		No text annotation
homologous
IL_6PRV_002
NA
IL_8OIR_0691/B8/636:643,
1/B8/1004:1010		8x7 Sarcin-Ricin; G-bulge
homologous
IL_5J7L_289
NA
IL_8OIR_0701/B8/659:663,
1/B8/771:778		No text annotation
IL_8OIR_0711/B8/679:681,
1/B8/692:694		No text annotation
IL_8OIR_1121/B8/707:711,
1/B8/741:749		No text annotation
IL_8OIR_1131/B8/714:730,
1/B8/733:738		No text annotation
IL_8OIR_1191/B8/786:791,
1/B8/996:998		No text annotation
IL_8OIR_0731/B8/797:799,
1/B8/988:990		Isolated tWW turn
homologous
IL_4WF9_063
IL_10432.1
IL_8OIR_0741/B8/800:803,
1/B8/986:987		Major groove platform; stack outside cWW
homologous
IL_7RQB_066
NA
IL_8OIR_1141/B8/800:808,
1/B8/983:987		No text annotation
homologous
IL_4WF9_117
IL_80252.1
IL_8OIR_0751/B8/803:808,
1/B8/983:986		Intercalated tWH
geometric
IL_5J7L_307
NA
IL_8OIR_0761/B8/808:817,
1/B8/978:983		No text annotation
IL_8OIR_0771/B8/820:821,
1/B8/973:975		Single bulged A
homologous
IL_7RQB_069
NA
IL_8OIR_0781/B8/878:881,
1/B8/896:897		Minor groove platform, major groove intercalation
homologous
IL_5J7L_314
NA
IL_8OIR_0791/B8/882:883,
1/B8/892:895		Major groove intercalation
homologous
IL_5J7L_315
NA
IL_8OIR_0801/B8/926:927,
1/B8/957:960		Multiple bulged bases
geometric
IL_7V9E_001
NA
IL_8OIR_0811/B8/927:938,
1/B8/954:957		No text annotation
homologous
IL_4WF9_077
IL_84014.1
IL_8OIR_0821/B8/1042:1045,
1/B8/1434:1436		Major groove platform with extra pair
geometric
IL_5TBW_091
NA
IL_8OIR_0831/B8/1047:1049,
1/B8/1429:1432		No text annotation
homologous
IL_5J7L_321
NA
IL_8OIR_0841/B8/1060:1062,
1/B8/1259:1260		Single bulged U
homologous
IL_7RQB_080
NA
IL_8OIR_0851/B8/1063:1064,
1/B8/1255:1258		Minor groove platform
homologous
IL_4WF9_081
IL_34520.2
IL_8OIR_1151/B8/1074:1076,
1/B8/1132:1133		Minor groove platform
geometric
IL_8VTW_003
NA
IL_8OIR_0871/B8/1083:1088,
1/B8/1118:1125		No text annotation
IL_8OIR_0881/B8/1179:1185,
1/B8/1207:1219		No text annotation
IL_8OIR_0891/B8/1186:1190,
1/B8/1202:1206		Double sheared with non-canonical cWW
geometric
IL_5J7L_274
NA
IL_8OIR_0901/B8/1270:1271,
1/B8/1315:1317		Single stack bend
homologous
IL_4WF9_089
IL_15011.2
IL_8OIR_0911/B8/1271:1272,
1/B8/1313:1315		Major groove platform
geometric
IL_4V9F_082
IL_48076.8
IL_8OIR_0921/B8/1273:1276,
1/B8/1310:1312		Major groove platform with extra pair
homologous
IL_7RQB_093
NA
IL_8OIR_0931/B8/1276:1278,
1/B8/1306:1310		Major groove minor groove platform with extra cWW
geometric
IL_7RQB_094
NA
IL_8OIR_0941/B8/1283:1285,
1/B8/1298:1301		No text annotation
geometric
IL_4P3T_002
NA
IL_8OIR_0951/B8/1285:1287,
1/B8/1297:1298		Minor groove platform
geometric
IL_4V88_454
NA
IL_8OIR_1171/B8/1324:1325,
1/B8/1397:1399		Major groove platform
homologous
IL_5J7L_394
NA
IL_8OIR_0971/B8/1327:1329,
1/B8/1391:1395		Isolated non-canonical cWW with bulges
homologous
IL_7RQB_097
NA
IL_8OIR_0981/B8/1329:1330,
1/B8/1388:1391		No text annotation
geometric
IL_5J7L_341
NA
IL_8OIR_0991/B8/1338:1340,
1/B8/1357:1361		No text annotation
IL_8OIR_1011/B8/1408:1409,
1/B8/1418:1420		Single bulged A
homologous
IL_7RQB_101
NA
IL_8OIR_1021/B8/1445:1447,
1/B8/1469:1471		No text annotation
geometric
IL_2ZNI_001
NA
IL_8OIR_1031/B8/1449:1456,
1/B8/1461:1467		8x7 Sarcin-Ricin; G-bulge
geometric
IL_5TBW_116
NA
IL_8OIR_1041/B8/1478:1482,
1/B8/1491:1493		C-loop
geometric
IL_7RQB_051
NA
IL_8OIR_1051/B8/1542:1543,
1/B8/1557:1560		Major groove intercalation
geometric
IL_1U9S_003
IL_71421.2
IL_8OIR_1071/B9/26:28,
1/B9/38:40		Isolated non-canonical cWW pair
geometric
IL_4WF9_042
IL_01003.2

Problematic loops

#loop idProblemSequence
IL_8OIR_040No text annotation
IL_8OIR_111No text annotation
IL_8OIR_048Tandem non-canonical cWW pairs
IL_8OIR_072No text annotation
IL_8OIR_086No text annotation
IL_8OIR_116No text annotation
IL_8OIR_096No text annotation
IL_8OIR_100Isolated non-canonical cWW pair
IL_8OIR_106Isolated non-canonical cWW pair

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_8OIR_0011/AA/30:33,
1/AA/219:225,
1/AA/270:273		No text annotation
J3_8OIR_0021/AA/40:43,
1/AA/176:183,
1/AA/209:211		No text annotation
J3_8OIR_0141/AA/326:327,
1/AA/367:373,
1/AA/383:384		No text annotation
J3_8OIR_0031/AA/545:547,
1/AA/781:787,
1/AA/809:815		No text annotation
J3_8OIR_0041/AA/551:554,
1/AA/717:719,
1/AA/774:777		No text annotation
homologous
J3_4LFB_003
J3_44359.1
J3_8OIR_0051/AA/563:569,
1/AA/580:591,
1/AA/704:707		No text annotation
J3_8OIR_0181/AA/621:626,
1/AA/655:661,
1/AA/670:676		No text annotation
homologous
J3_4LFB_007
J3_01343.1
J3_8OIR_0191/AA/719:723,
1/AA/735:741,
1/AA/771:774		No text annotation
J3_8OIR_0081/B8/8:11,
1/B8/101:115,
1/B8/122:127		No text annotation
J3_8OIR_0151/B8/14:52,
1/B8/59:69,
1/B8/88:97		No text annotation
J3_8OIR_0091/B8/245:251,
1/B8/313:315,
1/B8/331:334		No text annotation
homologous
J3_4WF9_002
J3_46658.1
J3_8OIR_0101/B8/260:262,
1/B8/272:276,
1/B8/300:303		No text annotation
homologous
J3_7RQB_005
NA
J3_8OIR_0161/B8/483:498,
1/B8/522:527,
1/B8/542:578		No text annotation
J3_8OIR_0111/B8/666:673,
1/B8/753:757,
1/B8/766:768		No text annotation
J3_8OIR_0121/B8/673:675,
1/B8/698:705,
1/B8/751:753		No text annotation
J3_8OIR_0171/B8/1176:1178,
1/B8/1220:1230,
1/B8/1239:1245		No text annotation
J3_8OIR_0131/B8/1334:1337,
1/B8/1362:1364,
1/B8/1378:1384		No text annotation
homologous
J3_7RQB_012
NA
J4_8OIR_0011/AA/51:54,
1/AA/61:68,
1/AA/153:155,
1/AA/164:170		No text annotation
J4_8OIR_0021/AA/70:77,
1/AA/103:106,
1/AA/142:144,
1/AA/150:151		No text annotation
J4_8OIR_0031/AA/294:296,
1/AA/405:410,
1/AA/451:462,
1/AA/485:486		No text annotation
homologous
J4_5J7L_003
NA
J4_8OIR_0041/AG/7:10,
1/AG/22:24,
1/AG/40:45,
1/AG/60:61		No text annotation
J4_8OIR_0051/B8/644:647,
1/B8/656:657,
1/B8/780:783,
1/B8/1001:1003		No text annotation
J4_8OIR_0061/B8/666:675,
1/B8/698:705,
1/B8/751:757,
1/B8/766:768		No text annotation
J4_8OIR_0071/B8/822:826,
1/B8/838:843,
1/B8/867:872,
1/B8/967:972		No text annotation
J4_8OIR_0081/B8/874:876,
1/B8/899:900,
1/B8/917:926,
1/B8/960:965		No text annotation
homologous
J4_5J7L_026
NA
J4_8OIR_0091/B8/1441:1443,
1/B8/1473:1474,
1/B8/1497:1504,
1/B8/1525:1532		No text annotation
J4_8OIR_0101/B9/7:10,
1/B9/23:25,
1/B9/41:47,
1/B9/60:62		No text annotation
J5_8OIR_0011/B8/157:159,
1/B8/171:175,
1/B8/188:190,
1/B8/635:636,
1/B8/1010:1011		No text annotation
homologous
J5_9DFE_003
J5_43153.6
J5_8OIR_0051/B8/195:205,
1/B8/229:233,
1/B8/349:352,
1/B8/601:605,
1/B8/620:630		No text annotation
J5_8OIR_0031/B8/1050:1057,
1/B8/1263:1270,
1/B8/1317:1324,
1/B8/1399:1405,
1/B8/1423:1428		No text annotation
J5_8OIR_0041/B8/1067:1070,
1/B8/1137:1140,
1/B8/1152:1153,
1/B8/1175:1176,
1/B8/1245:1252		No text annotation
homologous
J5_7A0S_007
J5_39529.2
J6_8OIR_0011/B8/357:362,
1/B8/373:375,
1/B8/425:428,
1/B8/453:457,
1/B8/468:473,
1/B8/587:596		No text annotation
J6_8OIR_0021/B8/1067:1070,
1/B8/1137:1140,
1/B8/1152:1153,
1/B8/1175:1178,
1/B8/1220:1230,
1/B8/1239:1252		No text annotation

Problematic loops

#loop idProblemSequence
J3_8OIR_006No text annotation
J3_8OIR_007No text annotation
J5_8OIR_002No text annotation

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