HL_8OIR_017

3D structure

PDB id

8OIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S human mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UACCCCA

Length

7 nucleotides

Bulged bases

8OIR|1|AA|C|730, 8OIR|1|AA|C|731

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8OIR_017 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.1671

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

8OIR|1|AA|U|726
8OIR|1|AA|A|727
8OIR|1|AA|C|728
8OIR|1|AA|C|729
8OIR|1|AA|C|730
8OIR|1|AA|C|731
8OIR|1|AA|A|732

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AF

28S ribosomal protein S7, mitochondrial

Chain AX

28S ribosomal protein S29, mitochondrial

Chain Ag

28S ribosomal protein S9, mitochondrial