HL_8OIR_019
3D structure
- PDB id
- 8OIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S human mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAGUAGAGUGC
- Length
- 11 nucleotides
- Bulged bases
- 8OIR|1|AA|U|801
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIR_019 not in the Motif Atlas
- Homologous match to HL_4LFB_030
- Geometric discrepancy: 0.3227
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.1
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8OIR|1|AA|G|793
8OIR|1|AA|A|794
8OIR|1|AA|G|795
8OIR|1|AA|U|796
8OIR|1|AA|A|797
8OIR|1|AA|G|798
8OIR|1|AA|A|799
8OIR|1|AA|G|800
8OIR|1|AA|U|801
8OIR|1|AA|G|802
8OIR|1|AA|C|803
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AH
- 28S ribosomal protein S10, mitochondrial
- Chain AK
- 28S ribosomal protein S14, mitochondrial
- Chain AZ
- 28S ribosomal protein S33, mitochondrial
- Chain Ag
- 28S ribosomal protein S9, mitochondrial
Coloring options: