HL_8OIR_027
3D structure
- PDB id
- 8OIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S human mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGCAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIR_027 not in the Motif Atlas
- Homologous match to HL_4WF9_015
- Geometric discrepancy: 0.075
- The information below is about HL_4WF9_015
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 397
Unit IDs
8OIR|1|B8|C|116
8OIR|1|B8|G|117
8OIR|1|B8|C|118
8OIR|1|B8|A|119
8OIR|1|B8|A|120
8OIR|1|B8|G|121
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BB
- 39S ribosomal protein L23, mitochondrial
- Chain BJ
- 39S ribosomal protein L34, mitochondrial
- Chain BN
- 39S ribosomal protein L4, mitochondrial
- Chain Bq
- 39S ribosomal protein L41, mitochondrial
- Chain Bu
- 39S ribosomal protein L45, mitochondrial
Coloring options: