HL_8OIR_037
3D structure
- PDB id
- 8OIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S human mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAAAAAC
- Length
- 8 nucleotides
- Bulged bases
- 8OIR|1|B8|A|461
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIR_037 not in the Motif Atlas
- Homologous match to HL_5J7L_160
- Geometric discrepancy: 0.224
- The information below is about HL_5J7L_160
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_42998.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8OIR|1|B8|G|459
8OIR|1|B8|A|460
8OIR|1|B8|A|461
8OIR|1|B8|A|462
8OIR|1|B8|A|463
8OIR|1|B8|A|464
8OIR|1|B8|A|465
8OIR|1|B8|C|466
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BG
- 39S ribosomal protein L30, mitochondrial
- Chain BP
- 39S ribosomal protein L10, mitochondrial
- Chain BU
- 39S ribosomal protein L16, mitochondrial
- Chain BY
- 39S ribosomal protein L20, mitochondrial
- Chain BZ
- 39S ribosomal protein L21, mitochondrial
- Chain Be
- Ribosomal protein 63, mitochondrial
- Chain Bh
- 39S ribosomal protein S18a, mitochondrial
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