HL_8OIR_040
3D structure
- PDB id
- 8OIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S human mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UCACCCUA
- Length
- 8 nucleotides
- Bulged bases
- 8OIR|1|B8|C|613
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIR_040 not in the Motif Atlas
- Geometric match to HL_1KH6_003
- Geometric discrepancy: 0.2992
- The information below is about HL_1KH6_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8OIR|1|B8|U|609
8OIR|1|B8|C|610
8OIR|1|B8|A|611
8OIR|1|B8|C|612
8OIR|1|B8|C|613
8OIR|1|B8|C|614
8OIR|1|B8|U|615
8OIR|1|B8|A|616
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BN
- 39S ribosomal protein L4, mitochondrial
- Chain BT
- 39S ribosomal protein L15, mitochondrial
- Chain Be
- Ribosomal protein 63, mitochondrial
- Chain Bs
- 39S ribosomal protein L43, mitochondrial
- Chain Bt
- 39S ribosomal protein L44, mitochondrial
- Chain By
- 39S ribosomal protein L50, mitochondrial
- Chain Bz
- 39S ribosomal protein L51, mitochondrial
Coloring options: