HL_8OIR_046

3D structure

PDB id

8OIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S human mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AGCAUCACCAGUAUU

Length

15 nucleotides

Bulged bases

8OIR|1|B8|A|851, 8OIR|1|B8|C|853, 8OIR|1|B8|U|861

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIR|1|B8|A|848
8OIR|1|B8|G|849
8OIR|1|B8|C|850
8OIR|1|B8|A|851
8OIR|1|B8|U|852
8OIR|1|B8|C|853
8OIR|1|B8|A|854
8OIR|1|B8|C|855
8OIR|1|B8|C|856
8OIR|1|B8|A|857
8OIR|1|B8|G|858
8OIR|1|B8|U|859
8OIR|1|B8|A|860
8OIR|1|B8|U|861
8OIR|1|B8|U|862

Current chains

Chain B8

16S rRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BL

39S ribosomal protein L2, mitochondrial

Chain Bm

39S ribosomal protein L37, mitochondrial