HL_8OIR_050
3D structure
- PDB id
- 8OIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S human mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUGAAGAGGC
- Length
- 10 nucleotides
- Bulged bases
- 8OIR|1|B8|A|1023, 8OIR|1|B8|A|1024, 8OIR|1|B8|G|1025
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIR_050 not in the Motif Atlas
- Homologous match to HL_4WF9_047
- Geometric discrepancy: 0.1405
- The information below is about HL_4WF9_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
8OIR|1|B8|G|1020
8OIR|1|B8|U|1021
8OIR|1|B8|G|1022
8OIR|1|B8|A|1023
8OIR|1|B8|A|1024
8OIR|1|B8|G|1025
8OIR|1|B8|A|1026
8OIR|1|B8|G|1027
8OIR|1|B8|G|1028
8OIR|1|B8|C|1029
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BH
- 39S ribosomal protein L32, mitochondrial
- Chain BM
- 39S ribosomal protein L3, mitochondrial
- Chain BZ
- 39S ribosomal protein L21, mitochondrial
- Chain Be
- Ribosomal protein 63, mitochondrial
- Chain Bh
- 39S ribosomal protein S18a, mitochondrial
Coloring options: