HL_8OIR_053

3D structure

PDB id

8OIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S human mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCAGAACCCAACC

Length

13 nucleotides

Bulged bases

8OIR|1|B8|G|1161, 8OIR|1|B8|A|1162, 8OIR|1|B8|C|1169

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIR|1|B8|G|1158
8OIR|1|B8|C|1159
8OIR|1|B8|A|1160
8OIR|1|B8|G|1161
8OIR|1|B8|A|1162
8OIR|1|B8|A|1163
8OIR|1|B8|C|1164
8OIR|1|B8|C|1165
8OIR|1|B8|C|1166
8OIR|1|B8|A|1167
8OIR|1|B8|A|1168
8OIR|1|B8|C|1169
8OIR|1|B8|C|1170

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BD

39S ribosomal protein L27, mitochondrial

Chain BG

39S ribosomal protein L30, mitochondrial

Chain BU

39S ribosomal protein L16, mitochondrial

Chain Bn

39S ribosomal protein L38, mitochondrial

Chain Bw

39S ribosomal protein L48, mitochondrial