HL_8OIS_003
3D structure
- PDB id
- 8OIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CACCACG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIS_003 not in the Motif Atlas
- Geometric match to HL_6U8D_003
- Geometric discrepancy: 0.3528
- The information below is about HL_6U8D_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01957.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 18
Unit IDs
8OIS|1|AA|C|87
8OIS|1|AA|A|88
8OIS|1|AA|C|89
8OIS|1|AA|C|90
8OIS|1|AA|A|91
8OIS|1|AA|C|92
8OIS|1|AA|G|93
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AM
- 28S ribosomal protein S16, mitochondrial
- Chain AU
- 28S ribosomal protein S26, mitochondrial
- Chain Aj
- 28S ribosomal protein S34, mitochondrial
Coloring options: