HL_8OIS_007
3D structure
- PDB id
- 8OIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGAAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIS_007 not in the Motif Atlas
- Homologous match to HL_4LFB_010
- Geometric discrepancy: 0.1977
- The information below is about HL_4LFB_010
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 434
Unit IDs
8OIS|1|AA|C|195
8OIS|1|AA|G|196
8OIS|1|AA|A|197
8OIS|1|AA|A|198
8OIS|1|AA|A|199
8OIS|1|AA|G|200
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AM
- 28S ribosomal protein S16, mitochondrial
- Chain AO
- 28S ribosomal protein S18b, mitochondrial
- Chain AU
- 28S ribosomal protein S26, mitochondrial
- Chain Aj
- 28S ribosomal protein S34, mitochondrial
Coloring options: