HL_8OIT_026

3D structure

PDB id

8OIT (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CACAUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8OIT_026 not in the Motif Atlas

Geometric match to HL_5TBW_006

Geometric discrepancy: 0.1385

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

8OIT|1|B8|C|885
8OIT|1|B8|A|886
8OIT|1|B8|C|887
8OIT|1|B8|A|888
8OIT|1|B8|U|889
8OIT|1|B8|G|890

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BL

39S ribosomal protein L2, mitochondrial