HL_8OJ5_068
3D structure
- PDB id
- 8OJ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGAAUUGCAGGACAUGAUC
- Length
- 20 nucleotides
- Bulged bases
- 8OJ5|1|8|A|80, 8OJ5|1|8|C|81, 8OJ5|1|8|U|86
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8OJ5|1|8|G|68
8OJ5|1|8|U|69
8OJ5|1|8|G|70
8OJ5|1|8|A|71
8OJ5|1|8|A|72
8OJ5|1|8|U|73
8OJ5|1|8|U|74
8OJ5|1|8|G|75
8OJ5|1|8|C|76
8OJ5|1|8|A|77
8OJ5|1|8|G|78
8OJ5|1|8|G|79
8OJ5|1|8|A|80
8OJ5|1|8|C|81
8OJ5|1|8|A|82
8OJ5|1|8|U|86
8OJ5|1|8|G|87
8OJ5|1|8|A|88
8OJ5|1|8|U|89
8OJ5|1|8|C|90
Current chains
- Chain 8
- 5.8S rRNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain C
- DDRGK domain-containing protein 1
- Chain LY
- 60S ribosomal protein L26
- Chain Lh
- 60S ribosomal protein L35
- Chain Lj
- 60S ribosomal protein L37
- Chain Ll
- 60S ribosomal protein L39
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