HL_8ONY_006

3D structure

PDB id

8ONY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human Methionine Aminopeptidase 2 at the 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

GGUAGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ONY_006 not in the Motif Atlas

Geometric match to HL_8KAL_003

Geometric discrepancy: 0.2874

The information below is about HL_8KAL_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

8ONY|1|5|G|2901
8ONY|1|5|G|2902
8ONY|1|5|U|3595
8ONY|1|5|A|3596
8ONY|1|5|G|3597
8ONY|1|5|C|3598

Current chains

Chain 5

28S rRNA

Nearby chains

Chain LR

60S ribosomal protein L19