HL_8OVE_014

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GCCGACCGUGUGGUUGUUU

Length

19 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|AA|G|578
8OVE|1|AA|C|579
8OVE|1|AA|C|580
8OVE|1|AA|G|581
8OVE|1|AA|A|582
8OVE|1|AA|C|583
8OVE|1|AA|C|584
8OVE|1|AA|G|585
8OVE|1|AA|U|586
8OVE|1|AA|G|587
8OVE|1|AA|U|598
8OVE|1|AA|G|599
8OVE|1|AA|G|600
8OVE|1|AA|U|601
8OVE|1|AA|U|602
8OVE|1|AA|G|603
8OVE|1|AA|U|604
8OVE|1|AA|U|605
8OVE|1|AA|U|606

Current chains

Chain AA

SSU rRNA

Nearby chains

Chain A6

Probable 40S ribosomal protein S9

Chain AY

40S ribosomal protein S30