HL_8OVE_015

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GAUACUCAAACCCAUU

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|AA|G|616
8OVE|1|AA|A|617
8OVE|1|AA|U|618
8OVE|1|AA|A|619
8OVE|1|AA|C|620
8OVE|1|AA|U|621
8OVE|1|AA|C|622
8OVE|1|AA|A|623
8OVE|1|AA|A|624
8OVE|1|AA|A|625
8OVE|1|AA|C|626
8OVE|1|AA|C|627
8OVE|1|AA|C|628
8OVE|1|AA|A|629
8OVE|1|AA|U|630
8OVE|1|AA|U|631

Current chains

Chain AA

SSU rRNA

Nearby chains

Chain A1

40S ribosomal protein S4

Chain A6

Probable 40S ribosomal protein S9

Chain AT

40S ribosomal protein S24