HL_8OVE_017

3D structure

PDB id

8OVE (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GUCCCGUACCU

Length

11 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OVE|1|AA|G|769
8OVE|1|AA|U|770
8OVE|1|AA|C|771
8OVE|1|AA|C|772
8OVE|1|AA|C|773
8OVE|1|AA|G|774
8OVE|1|AA|U|775
8OVE|1|AA|A|778
8OVE|1|AA|C|779
8OVE|1|AA|C|780
8OVE|1|AA|U|781

Current chains

Chain AA

SSU rRNA

Nearby chains

Chain AC

40S ribosomal protein SA

Chain AL

40S ribosomal protein S17, putative

Chain AR

40S ribosomal protein S21, putative